tree-puzzle-5.2-6-rosa.lts2012.0.x86_64.rpm


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Description

tree-puzzle - Maximum likelihood analysis for nucleotide, amino acid and two-state data

Property Value
Distribution ROSA Enterprise Desktop
Repository ROSA Contrib Updates x86_64
Package name tree-puzzle
Package version 5.2
Package release 6-rosa.lts2012.0
Package architecture x86_64
Package type rpm
Installed size 944.14 KB
Download size 562.39 KB
Official Mirror mirror.rosalab.ru
TREE-PUZZLE is a computer program to reconstruct phylogenetic trees
from molecular sequence data by maximum likelihood. It implements a
fast tree search algorithm, quartet puzzling, that allows analysis
of large data sets and automatically assigns estimations of support
to each internal branch. TREE-PUZZLE also computes pairwise maximum
likelihood distances as well as branch lengths for user specified trees.
In addition, TREE-PUZZLE offers a novel method, likelihood mapping,
to investigate the support of a hypothesized internal branch without
computing an overall tree and to visualize the phylogenetic content
of a sequence alignment.

Alternatives

Package Version Architecture Repository
tree-puzzle-5.2-6-rosa.lts2012.0.x86_64.rpm 5.2 x86_64 ROSA Contrib
tree-puzzle-5.2-6-rosa.lts2012.0.i586.rpm 5.2 i586 ROSA Contrib Updates
tree-puzzle - - -

Requires

Name Value
libc.so.6()(64bit) -
libc.so.6(GLIBC_2.2.5)(64bit) -
libc.so.6(GLIBC_2.3)(64bit) -
libc.so.6(GLIBC_2.3.4)(64bit) -
libc.so.6(GLIBC_2.4)(64bit) -
libc.so.6(GLIBC_2.7)(64bit) -
libm.so.6()(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -

Provides

Name Value
tree-puzzle == 5.2-6:2012.0

Download

Type URL
Binary Package tree-puzzle-5.2-6-rosa.lts2012.0.x86_64.rpm
Source Package tree-puzzle-5.2-6.src.rpm

Install Howto

  1. Enable ROSA Contrib Updates repository on Install and Remove Software
  2. Update packages list:
    # urpmi.update -a
  3. Install tree-puzzle rpm package:
    # urpmi tree-puzzle

Files

Path
/usr/bin/puzzle
/usr/share/doc/tree-puzzle/AUTHORS
/usr/share/doc/tree-puzzle/COPYING
/usr/share/doc/tree-puzzle/ChangeLog
/usr/share/doc/tree-puzzle/EF.3trees
/usr/share/doc/tree-puzzle/EF.phy
/usr/share/doc/tree-puzzle/README
/usr/share/doc/tree-puzzle/atp6.a
/usr/share/doc/tree-puzzle/globin.a
/usr/share/doc/tree-puzzle/globin.ctrees
/usr/share/doc/tree-puzzle/globin.trees
/usr/share/doc/tree-puzzle/marswolf.ctrees
/usr/share/doc/tree-puzzle/marswolf.n
/usr/share/doc/tree-puzzle/marswolf.trees
/usr/share/doc/tree-puzzle/primates.b
/usr/share/doc/tree-puzzle/primates.ctrees
/usr/share/doc/tree-puzzle/primates.trees
/usr/share/doc/tree-puzzle/tree-puzzle.pdf

Changelog

2010-12-08 - Oden Eriksson <oeriksson@mandriva.com> 5.2-6mdv2011.0
+ Revision: 615238
- the mass rebuild of 2010.1 packages
2010-03-15 - Eric Fernandez <zeb@mandriva.org> 5.2-5mdv2010.1
+ Revision: 519809
- bump release version and rebuild

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tritonus-aos-0.3.7-0.0.20110107.1-rosa.lts2012.0.x86_64.rpm An add-on to the Java Sound API
tritonus-cdda-0.3.7-0.0.20110107.1-rosa.lts2012.0.x86_64.rpm A plug-in for Java that enables you to digitally read audio CD's
tritonus-core-0.3.7-0.0.20110107.1-rosa.lts2012.0.x86_64.rpm Contains public classes and SPI instantiation support
tritonus-dsp-0.3.7-0.0.20110107.1-rosa.lts2012.0.x86_64.rpm A collection of classes for digital signal processing (DSP)
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