R-BSgenome.Celegans.UCSC.ce2-1.3.19-2-rosa2014.1.noarch.rpm


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Description

R-BSgenome.Celegans.UCSC.ce2 - Caenorhabditis elegans (Worm) full genome (UCSC version ce2)

Property Value
Distribution ROSA 2014.1
Repository ROSA Contrib x86_64
Package name R-BSgenome.Celegans.UCSC.ce2
Package version 1.3.19
Package release 2-rosa2014.1
Package architecture noarch
Package type rpm
Installed size 28.85 MB
Download size 28.85 MB
Official Mirror mirror.rosalab.ru
Caenorhabditis elegans (Worm) full genome as provided by UCSC (ce2, Mar.
2004) and stored in Biostrings objects.

Alternatives

Package Version Architecture Repository
R-BSgenome.Celegans.UCSC.ce2-1.3.19-2-rosa2014.1.noarch.rpm 1.3.19 noarch ROSA Contrib
R-BSgenome.Celegans.UCSC.ce2 - - -

Requires

Name Value
R-BSgenome -
R-core -

Provides

Name Value
R-BSgenome.Celegans.UCSC.ce2 == 1.3.19-2:2014.1

Download

Type URL
Binary Package R-BSgenome.Celegans.UCSC.ce2-1.3.19-2-rosa2014.1.noarch.rpm
Source Package R-BSgenome.Celegans.UCSC.ce2-1.3.19-2.src.rpm

Install Howto

  1. Enable ROSA Contrib repository on Install and Remove Software"
  2. Update packages list:
    # urpmi.update -a
  3. Install R-BSgenome.Celegans.UCSC.ce2 rpm package:
    # urpmi R-BSgenome.Celegans.UCSC.ce2

Files

Path
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/DESCRIPTION
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/INDEX
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/NAMESPACE
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/Meta/Rd.rds
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/Meta/hsearch.rds
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/Meta/links.rds
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/Meta/nsInfo.rds
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/Meta/package.rds
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/R/BSgenome.Celegans.UCSC.ce2
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/R/BSgenome.Celegans.UCSC.ce2.rdb
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/R/BSgenome.Celegans.UCSC.ce2.rdx
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/extdata/chrI.rda
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/extdata/chrII.rda
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/extdata/chrIII.rda
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/extdata/chrIV.rda
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/extdata/chrM.rda
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/extdata/chrV.rda
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/extdata/chrX.rda
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/extdata/seqlengths.rda
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/extdata/upstream1000.rda
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/extdata/upstream2000.rda
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/extdata/upstream5000.rda
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/help/AnIndex
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/help/BSgenome.Celegans.UCSC.ce2.rdb
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/help/BSgenome.Celegans.UCSC.ce2.rdx
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/help/aliases.rds
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/help/paths.rds
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/html/00Index.html
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/html/R.css
/usr/share/R/library/BSgenome.Celegans.UCSC.ce2/html/package.html

Changelog

2014-07-25 - Denis Silakov <denis.silakov@rosalab.ru> 1.3.19-2
+ Revision: ba99c7b
- MassBuild#464: Increase release tag

See Also

Package Description
R-BSgenome.Dmelanogaster.UCSC.dm3-1.3.19-2-rosa2014.1.noarch.rpm Drosophila melanogaster (Fly) full genome (UCSC version dm3)
R-BSgenome.Hsapiens.UCSC.hg18-1.3.19-2-rosa2014.1.noarch.rpm Homo sapiens (Human) full genome (UCSC version hg18)
R-BSgenome.Hsapiens.UCSC.hg19-1.3.19-2-rosa2014.1.noarch.rpm Homo sapiens (Human) full genome (UCSC version hg19)
R-BatchJobs-1.3-1-rosa2014.1.noarch.rpm Batch computing with R
R-BayesX-0.2.7-2-rosa2014.1.x86_64.rpm R Utilities Accompanying the Software Package BayesX
R-Biobase-2.22.0-2-rosa2014.1.x86_64.rpm Biobase: Base functions for Bioconductor
R-BiocGenerics-0.8.0-2-rosa2014.1.noarch.rpm Generic functions for Bioconductor
R-BiocInstaller-1.14.2-1-rosa2014.1.noarch.rpm Install/Update Bioconductor and CRAN Packages
R-BiocStyle-1.0.0-2-rosa2014.1.x86_64.rpm Standard styles for vignettes and other Bioconductor documents
R-Biostrings-2.30.1-2-rosa2014.1.x86_64.rpm String objects representing biological sequences, and matching algorithms
R-BradleyTerry2-1.0.5-1-rosa2014.1.x86_64.rpm Bradley-Terry Models
R-Cairo-1.5.6-2-rosa2014.1.x86_64.rpm Graphics device using cairo for creating high-quality output
R-CircStats-0.2_4-3-rosa2014.1.noarch.rpm Circular Statistics, from "Topics in circular Statistics" (2001)
R-CompQuadForm-1.4-3-rosa2014.1.x86_64.rpm Distribution function of quadratic forms in normal variables
R-CoxBoost-1.4-2-rosa2014.1.x86_64.rpm Cox models by likelihood based boosting
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