R-annotate-1.40.0-2-rosa2014.1.x86_64.rpm


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Description

R-annotate - Annotation for microarrays

Property Value
Distribution ROSA 2014.1
Repository ROSA Contrib x86_64
Package name R-annotate
Package version 1.40.0
Package release 2-rosa2014.1
Package architecture x86_64
Package type rpm
Installed size 2.21 MB
Download size 1.83 MB
Official Mirror mirror.rosalab.ru
Using R enviroments for annotation.

Alternatives

Package Version Architecture Repository
R-annotate-1.40.0-2-rosa2014.1.i586.rpm 1.40.0 i586 ROSA Contrib
R-annotate - - -

Requires

Name Value
R-AnnotationDbi -
R-Biobase -
R-Biostrings -
R-DBI -
R-GO.db -
R-XML -
R-genefilter -
R-graphics -
R-hgu95av2.db -
R-hom.Hs.inp.db -
R-methods -
R-org.Hs.eg.db -
R-org.Mm.eg.db -
R-rae230a.db -
R-rae230aprobe -
R-stats -
R-tkWidgets -
R-utils -
R-xtable -

Provides

Name Value
R-annotate == 1.40.0-2:2014.1

Download

Type URL
Binary Package R-annotate-1.40.0-2-rosa2014.1.x86_64.rpm
Source Package R-annotate-1.40.0-2.src.rpm

Install Howto

  1. Enable ROSA Contrib repository on Install and Remove Software"
  2. Update packages list:
    # urpmi.update -a
  3. Install R-annotate rpm package:
    # urpmi R-annotate

Files

Path
/usr/lib64/R/library/annotate/DESCRIPTION
/usr/lib64/R/library/annotate/INDEX
/usr/lib64/R/library/annotate/NAMESPACE
/usr/lib64/R/library/annotate/Meta/Rd.rds
/usr/lib64/R/library/annotate/Meta/data.rds
/usr/lib64/R/library/annotate/Meta/hsearch.rds
/usr/lib64/R/library/annotate/Meta/links.rds
/usr/lib64/R/library/annotate/Meta/nsInfo.rds
/usr/lib64/R/library/annotate/Meta/package.rds
/usr/lib64/R/library/annotate/R/annotate
/usr/lib64/R/library/annotate/R/annotate.rdb
/usr/lib64/R/library/annotate/R/annotate.rdx
/usr/lib64/R/library/annotate/data/hgByChroms.rda
/usr/lib64/R/library/annotate/data/hgCLengths.rda
/usr/lib64/R/library/annotate/data/hgu95AProbLocs.rda
/usr/lib64/R/library/annotate/data/hgu95Achroloc.rda
/usr/lib64/R/library/annotate/data/hgu95Achrom.rda
/usr/lib64/R/library/annotate/data/hgu95All.rda
/usr/lib64/R/library/annotate/data/hgu95Asym.rda
/usr/lib64/R/library/annotate/doc/GOusage.R
/usr/lib64/R/library/annotate/doc/GOusage.Rnw
/usr/lib64/R/library/annotate/doc/GOusage.pdf
/usr/lib64/R/library/annotate/doc/OLDmake
/usr/lib64/R/library/annotate/doc/annotate.R
/usr/lib64/R/library/annotate/doc/annotate.Rfc
/usr/lib64/R/library/annotate/doc/annotate.Rnw
/usr/lib64/R/library/annotate/doc/annotate.bib
/usr/lib64/R/library/annotate/doc/annotate.pdf
/usr/lib64/R/library/annotate/doc/chromLoc.R
/usr/lib64/R/library/annotate/doc/chromLoc.Rnw
/usr/lib64/R/library/annotate/doc/chromLoc.pdf
/usr/lib64/R/library/annotate/doc/prettyOutput.R
/usr/lib64/R/library/annotate/doc/prettyOutput.Rnw
/usr/lib64/R/library/annotate/doc/prettyOutput.pdf
/usr/lib64/R/library/annotate/doc/query.R
/usr/lib64/R/library/annotate/doc/query.Rnw
/usr/lib64/R/library/annotate/doc/query.pdf
/usr/lib64/R/library/annotate/doc/useDataPkgs.R
/usr/lib64/R/library/annotate/doc/useDataPkgs.Rnw
/usr/lib64/R/library/annotate/doc/useDataPkgs.pdf
/usr/lib64/R/library/annotate/doc/useHomology.R
/usr/lib64/R/library/annotate/doc/useHomology.Rnw
/usr/lib64/R/library/annotate/doc/useHomology.pdf
/usr/lib64/R/library/annotate/doc/useProbeInfo.R
/usr/lib64/R/library/annotate/doc/useProbeInfo.Rnw
/usr/lib64/R/library/annotate/doc/useProbeInfo.pdf
/usr/lib64/R/library/annotate/help/AnIndex
/usr/lib64/R/library/annotate/help/aliases.rds
/usr/lib64/R/library/annotate/help/annotate.rdb
/usr/lib64/R/library/annotate/help/annotate.rdx
/usr/lib64/R/library/annotate/help/paths.rds
/usr/lib64/R/library/annotate/html/00Index.html
/usr/lib64/R/library/annotate/html/ACCNUMStats.html
/usr/lib64/R/library/annotate/html/GO2heatmap.html
/usr/lib64/R/library/annotate/html/GOmnplot.html
/usr/lib64/R/library/annotate/html/HTMLPage-class.html
/usr/lib64/R/library/annotate/html/LL2homology.html
/usr/lib64/R/library/annotate/html/PMIDAmat.html
/usr/lib64/R/library/annotate/html/PWAmat.html
/usr/lib64/R/library/annotate/html/R.css
/usr/lib64/R/library/annotate/html/UniGeneQuery.html
/usr/lib64/R/library/annotate/html/accessionToUID.html
/usr/lib64/R/library/annotate/html/annPkgName.html
/usr/lib64/R/library/annotate/html/annotate-defunct.html
/usr/lib64/R/library/annotate/html/aqListGOIDs.html
/usr/lib64/R/library/annotate/html/blastSequences.html
/usr/lib64/R/library/annotate/html/buildChromLocation.html
/usr/lib64/R/library/annotate/html/buildPubMedAbst.html
/usr/lib64/R/library/annotate/html/chrCats.html
/usr/lib64/R/library/annotate/html/chromLocation-class.html
/usr/lib64/R/library/annotate/html/compatibleVersions.html
/usr/lib64/R/library/annotate/html/dropECode.html
/usr/lib64/R/library/annotate/html/entrezGeneByID.html
/usr/lib64/R/library/annotate/html/entrezGeneQuery.html
/usr/lib64/R/library/annotate/html/filterGOByOntology.html
/usr/lib64/R/library/annotate/html/findNeighbors.html
/usr/lib64/R/library/annotate/html/genbank.html
/usr/lib64/R/library/annotate/html/getAnnMap.html
/usr/lib64/R/library/annotate/html/getEvidence.html
/usr/lib64/R/library/annotate/html/getGOTerm.html
/usr/lib64/R/library/annotate/html/getOntology.html
/usr/lib64/R/library/annotate/html/getPMInfo.html
/usr/lib64/R/library/annotate/html/getSYMBOL.html
/usr/lib64/R/library/annotate/html/getSeq4Acc.html
/usr/lib64/R/library/annotate/html/getTDRows.html
/usr/lib64/R/library/annotate/html/hasGOannote.html
/usr/lib64/R/library/annotate/html/hgByChroms.html
/usr/lib64/R/library/annotate/html/hgCLengths.html
/usr/lib64/R/library/annotate/html/hgu95AProbLocs.html
/usr/lib64/R/library/annotate/html/hgu95Achroloc.html
/usr/lib64/R/library/annotate/html/hgu95Achrom.html
/usr/lib64/R/library/annotate/html/hgu95All.html
/usr/lib64/R/library/annotate/html/hgu95Asym.html
/usr/lib64/R/library/annotate/html/homoData-class.html
/usr/lib64/R/library/annotate/html/htmlpage.html
/usr/lib64/R/library/annotate/html/isValidkey.html
/usr/lib64/R/library/annotate/html/makeAnchor.html
/usr/lib64/R/library/annotate/html/mapOrgs.html
/usr/lib64/R/library/annotate/html/organism.html
/usr/lib64/R/library/annotate/html/p2LL.html
/usr/lib64/R/library/annotate/html/pm.abstGrep.html
/usr/lib64/R/library/annotate/html/pm.getabst.html
/usr/lib64/R/library/annotate/html/pm.titles.html
/usr/lib64/R/library/annotate/html/pmAbst2HTML.html
/usr/lib64/R/library/annotate/html/pmid2MIAME.html
/usr/lib64/R/library/annotate/html/pmidQuery.html
/usr/lib64/R/library/annotate/html/probesByLL.html
/usr/lib64/R/library/annotate/html/pubMedAbst-class.html
/usr/lib64/R/library/annotate/html/pubmed.html
/usr/lib64/R/library/annotate/html/readGEOAnn.html
/usr/lib64/R/library/annotate/html/serializeEnv.html
/usr/lib64/R/library/annotate/html/setRepository.html
/usr/lib64/R/library/annotate/html/updateSymbolsToValidKeys.html
/usr/lib64/R/library/annotate/html/usedChromGenes.html
/usr/lib64/R/library/annotate/misc/demowrite.html
/usr/lib64/R/library/annotate/misc/pmLinkGen.Rnw
/usr/lib64/R/library/annotate/misc/pmLinkGen.pdf
/usr/lib64/R/library/annotate/unitTests/test_getAnnMap.R

Changelog

2014-07-25 - Denis Silakov <denis.silakov@rosalab.ru> 1.40.0-2
+ Revision: 1738722
- MassBuild#464: Increase release tag

See Also

Package Description
R-ape-3.1.2-2-rosa2014.1.x86_64.rpm Analyses of Phylogenetics and Evolution
R-aplpack-1.2.9-2-rosa2014.1.x86_64.rpm Another Plot PACKage: stem.leaf, bagplot, faces, spin3R, slider functions
R-arm-1.6.10-2-rosa2014.1.noarch.rpm Data Analysis Using Regression and Multilevel/Hierarchical Models
R-arules-1.1.3-2-rosa2014.1.x86_64.rpm Mining Association Rules and Frequent Itemsets
R-arulesViz-0.1.9-2-rosa2014.1.x86_64.rpm arulesViz - Visualizing Association Rules and Frequent Itemsets
R-base64enc-0.1.2-1-rosa2014.1.x86_64.rpm Tools for base64 encoding
R-bdsmatrix-1.3.1-3-rosa2014.1.x86_64.rpm Routines for Block Diagonal Symmetric matrices
R-biclust-1.0.2-3-rosa2014.1.x86_64.rpm BiCluster Algorithms
R-biglm-0.9.1-2-rosa2014.1.x86_64.rpm bounded memory linear and generalized linear models
R-biomaRt-2.18.0-2-rosa2014.1.x86_64.rpm Interface to BioMart databases (e.g. Ensembl, COSMIC ,Wormbase and Gramene)
R-bitops-1.0.6-2-rosa2014.1.x86_64.rpm Functions for Bitwise operations
R-boot-1.3.10-2-rosa2014.1.noarch.rpm Bootstrap Functions (originally by Angelo Canty for S)
R-brew-1.0.6-1-rosa2014.1.x86_64.rpm Templating Framework for Report Generation
R-brglm-0.5.9-1-rosa2014.1.x86_64.rpm Bias reduction in binomial-response generalized linear models
R-ca-0.53-2-rosa2014.1.noarch.rpm Simple, Multiple and Joint Correspondence Analysis
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