R-leeBamViews-0.99.13-3-rosa2014.1.x86_64.rpm


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Description

R-leeBamViews - leeBamViews -- multiple yeast RNAseq samples excerpted from Lee 2009

Property Value
Distribution ROSA 2014.1
Repository ROSA Contrib x86_64
Package name R-leeBamViews
Package version 0.99.13
Package release 3-rosa2014.1
Package architecture x86_64
Package type rpm
Installed size 11.48 MB
Download size 11.31 MB
Official Mirror mirror.rosalab.ru
data from PMID 19096707; prototype for managing multiple NGS samples

Alternatives

Package Version Architecture Repository
R-leeBamViews-0.99.13-3-rosa2014.1.i586.rpm 0.99.13 i586 ROSA Contrib
R-leeBamViews - - -

Requires

Name Value
R-BSgenome -
R-Biobase -
R-GenomeGraphs -
R-GenomicRanges -
R-Rsamtools -
R-biomaRt -
R-edgeR -
R-methods -
R-org.Sc.sgd.db -

Provides

Name Value
R-leeBamViews == 0.99.13-3:2014.1

Download

Type URL
Binary Package R-leeBamViews-0.99.13-3-rosa2014.1.x86_64.rpm
Source Package R-leeBamViews-0.99.13-3.src.rpm

Install Howto

  1. Enable ROSA Contrib repository on Install and Remove Software
  2. Update packages list:
    # urpmi.update -a
  3. Install R-leeBamViews rpm package:
    # urpmi R-leeBamViews

Files

Path
/usr/lib64/R/library/leeBamViews/DESCRIPTION
/usr/lib64/R/library/leeBamViews/INDEX
/usr/lib64/R/library/leeBamViews/NAMESPACE
/usr/lib64/R/library/leeBamViews/Meta/Rd.rds
/usr/lib64/R/library/leeBamViews/Meta/data.rds
/usr/lib64/R/library/leeBamViews/Meta/hsearch.rds
/usr/lib64/R/library/leeBamViews/Meta/links.rds
/usr/lib64/R/library/leeBamViews/Meta/nsInfo.rds
/usr/lib64/R/library/leeBamViews/Meta/package.rds
/usr/lib64/R/library/leeBamViews/R/leeBamViews
/usr/lib64/R/library/leeBamViews/R/leeBamViews.rdb
/usr/lib64/R/library/leeBamViews/R/leeBamViews.rdx
/usr/lib64/R/library/leeBamViews/bam/isowt5_13e.bam
/usr/lib64/R/library/leeBamViews/bam/isowt5_13e.bam.bai
/usr/lib64/R/library/leeBamViews/bam/isowt6_13e.bam
/usr/lib64/R/library/leeBamViews/bam/isowt6_13e.bam.bai
/usr/lib64/R/library/leeBamViews/bam/rlp5_13e.bam
/usr/lib64/R/library/leeBamViews/bam/rlp5_13e.bam.bai
/usr/lib64/R/library/leeBamViews/bam/rlp6_13e.bam
/usr/lib64/R/library/leeBamViews/bam/rlp6_13e.bam.bai
/usr/lib64/R/library/leeBamViews/bam/ssr1_13e.bam
/usr/lib64/R/library/leeBamViews/bam/ssr1_13e.bam.bai
/usr/lib64/R/library/leeBamViews/bam/ssr2_13e.bam
/usr/lib64/R/library/leeBamViews/bam/ssr2_13e.bam.bai
/usr/lib64/R/library/leeBamViews/bam/xrn1_13e.bam
/usr/lib64/R/library/leeBamViews/bam/xrn1_13e.bam.bai
/usr/lib64/R/library/leeBamViews/bam/xrn2_13e.bam
/usr/lib64/R/library/leeBamViews/bam/xrn2_13e.bam.bai
/usr/lib64/R/library/leeBamViews/data/datalist
/usr/lib64/R/library/leeBamViews/data/leeRPKM.rda
/usr/lib64/R/library/leeBamViews/data/leeUnn.rda
/usr/lib64/R/library/leeBamViews/doc/leeFull-dol.pdf
/usr/lib64/R/library/leeBamViews/doc/leeViews.Rnw
/usr/lib64/R/library/leeBamViews/doc/leeViews.pdf
/usr/lib64/R/library/leeBamViews/doc/robb.bib
/usr/lib64/R/library/leeBamViews/help/AnIndex
/usr/lib64/R/library/leeBamViews/help/aliases.rds
/usr/lib64/R/library/leeBamViews/help/leeBamViews.rdb
/usr/lib64/R/library/leeBamViews/help/leeBamViews.rdx
/usr/lib64/R/library/leeBamViews/help/paths.rds
/usr/lib64/R/library/leeBamViews/html/00Index.html
/usr/lib64/R/library/leeBamViews/html/R.css
/usr/lib64/R/library/leeBamViews/html/bs1.html
/usr/lib64/R/library/leeBamViews/html/leeRPKM.html
/usr/lib64/R/library/leeBamViews/html/leeUnn.html
/usr/lib64/R/library/leeBamViews/html/tabulateReads.html
/usr/lib64/R/library/leeBamViews/html/totalReadCounts.html

Changelog

2014-07-25 - Denis Silakov <denis.silakov@rosalab.ru> 0.99.13-3
+ Revision: 709426a
- MassBuild#464: Increase release tag

See Also

Package Description
R-limma-3.18.2-2-rosa2014.1.x86_64.rpm Linear Models for Microarray Data
R-lme4-1.1.5-2-rosa2014.1.x86_64.rpm Linear mixed-effects models using S4 classes
R-lmtest-0.9.33-2-rosa2014.1.x86_64.rpm Testing Linear Regression Models
R-locfit-1.5_9.1-5-rosa2014.1.x86_64.rpm Local Regression, Likelihood and Density Estimation
R-logcondens-2.1.2-1-rosa2014.1.x86_64.rpm Estimate a Log-Concave Probability Density from iid Observations
R-logspline-2.1.5-2-rosa2014.1.x86_64.rpm Logspline density estimation routines
R-longmemo-1.0.0-2-rosa2014.1.noarch.rpm Statistics for Long-Memory Processes (Jan Beran) -- Data and Functions
R-lpSolve-5.6.7-3-rosa2014.1.x86_64.rpm Interface to Lp_solve v. 5.5 to solve linear/integer programs
R-lqa-1.0.3-2-rosa2014.1.x86_64.rpm Penalized Likelihood Inference for GLMs
R-lungExpression-0.2.0-1-rosa2014.1.noarch.rpm ExpressionSets for Parmigiani et al., 2004 Clinical Cancer Research paper
R-mapproj-1.2.2-2-rosa2014.1.x86_64.rpm Map Projections
R-maps-2.3.7-2-rosa2014.1.x86_64.rpm Draw Geographical Maps
R-maptools-0.8.29-2-rosa2014.1.x86_64.rpm Tools for reading and handling spatial objects
R-markdown-0.6.4-3-rosa2014.1.x86_64.rpm Markdown rendering for R
R-marray-1.40.0-2-rosa2014.1.x86_64.rpm Exploratory analysis for two-color spotted microarray data
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