tree-puzzle-5.2-6-rosa2014.1.x86_64.rpm


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Description

tree-puzzle - Maximum likelihood analysis for nucleotide, amino acid and two-state data

Property Value
Distribution ROSA 2014.1
Repository ROSA Contrib x86_64
Package name tree-puzzle
Package version 5.2
Package release 6-rosa2014.1
Package architecture x86_64
Package type rpm
Installed size 931.68 KB
Download size 561.53 KB
Official Mirror mirror.rosalab.ru
TREE-PUZZLE is a computer program to reconstruct phylogenetic trees
from molecular sequence data by maximum likelihood. It implements a
fast tree search algorithm, quartet puzzling, that allows analysis
of large data sets and automatically assigns estimations of support
to each internal branch. TREE-PUZZLE also computes pairwise maximum
likelihood distances as well as branch lengths for user specified trees.
In addition, TREE-PUZZLE offers a novel method, likelihood mapping,
to investigate the support of a hypothesized internal branch without
computing an overall tree and to visualize the phylogenetic content
of a sequence alignment.

Alternatives

Package Version Architecture Repository
tree-puzzle-5.2-6-rosa2014.1.i586.rpm 5.2 i586 ROSA Contrib
tree-puzzle - - -

Requires

Name Value
libc.so.6()(64bit) -
libc.so.6(GLIBC_2.14)(64bit) -
libc.so.6(GLIBC_2.2.5)(64bit) -
libc.so.6(GLIBC_2.3)(64bit) -
libc.so.6(GLIBC_2.3.4)(64bit) -
libc.so.6(GLIBC_2.4)(64bit) -
libc.so.6(GLIBC_2.7)(64bit) -
libm.so.6()(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -

Provides

Name Value
tree-puzzle == 5.2-6:2014.1

Download

Type URL
Binary Package tree-puzzle-5.2-6-rosa2014.1.x86_64.rpm
Source Package tree-puzzle-5.2-6.src.rpm

Install Howto

  1. Enable ROSA Contrib repository on Install and Remove Software"
  2. Update packages list:
    # urpmi.update -a
  3. Install tree-puzzle rpm package:
    # urpmi tree-puzzle

Files

Path
/usr/bin/puzzle
/usr/share/doc/tree-puzzle/AUTHORS
/usr/share/doc/tree-puzzle/COPYING
/usr/share/doc/tree-puzzle/ChangeLog
/usr/share/doc/tree-puzzle/EF.3trees
/usr/share/doc/tree-puzzle/EF.phy
/usr/share/doc/tree-puzzle/README
/usr/share/doc/tree-puzzle/atp6.a
/usr/share/doc/tree-puzzle/globin.a
/usr/share/doc/tree-puzzle/globin.ctrees
/usr/share/doc/tree-puzzle/globin.trees
/usr/share/doc/tree-puzzle/marswolf.ctrees
/usr/share/doc/tree-puzzle/marswolf.n
/usr/share/doc/tree-puzzle/marswolf.trees
/usr/share/doc/tree-puzzle/primates.b
/usr/share/doc/tree-puzzle/primates.ctrees
/usr/share/doc/tree-puzzle/primates.trees
/usr/share/doc/tree-puzzle/tree-puzzle.pdf

Changelog

2012-02-01 - Rosa <rosa@rosa-build.rosalab.ru> 5.2-6
+ Revision: d3f29ca
- Automatic import for version 5.2

See Also

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trilead-ssh2-213-12-rosa2014.1.noarch.rpm SSH-2 protocol implementation in pure Java
trilead-ssh2-javadoc-213-12-rosa2014.1.noarch.rpm Javadoc for trilead-ssh2
triplane-classic-1.04-2-rosa2014.1.x86_64.rpm A side-scrolling dogfighting game
trn-3.6-22-rosa2014.1.x86_64.rpm A news reader that displays postings in threaded format
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