primer3-2.3.6-3-rosa2016.1.i586.rpm


Advertisement

Description

primer3 - PCR reactions primers identification

Property Value
Distribution ROSA 2016.1
Repository ROSA Contrib i586
Package filename primer3-2.3.6-3-rosa2016.1.i586.rpm
Package name primer3
Package version 2.3.6
Package release 3-rosa2016.1
Package architecture i586
Package type rpm
Category Sciences/Biology
Homepage http://primer3.sourceforge.net/
License BSD and GPLv2+
Maintainer -
Download size 157.75 KB
Installed size 633.80 KB
Primer3 is a complete rewrite of the original PRIMER program
(Primer 0.5), written by Steve Lincoln, Mark Daly, and Eric
Lander.
Primer3 picks primers for PCR reactions, considering as criteria:
- oligonucleotide melting temperature, size, GC content,
and primer-dimer possibilities
- PCR product size
- positional constraints within the source sequence
- miscellaneous other constraints
All of these criteria are user-specifiable as constraints, and
some are specifiable as terms in an objective function that
characterizes an optimal primer pair.

Alternatives

Package Version Architecture Repository
primer3-2.3.6-3-rosa2016.1.x86_64.rpm 2.3.6 x86_64 ROSA Contrib
primer3 - - -

Requires

Name Value
libc.so.6 -
libc.so.6(GLIBC_2.0) -
libc.so.6(GLIBC_2.1) -
libc.so.6(GLIBC_2.11) -
libc.so.6(GLIBC_2.3) -
libc.so.6(GLIBC_2.3.4) -
libc.so.6(GLIBC_2.4) -
libgcc_s.so.1 -
libgcc_s.so.1(GCC_3.0) -
libm.so.6 -
libm.so.6(GLIBC_2.0) -
libm.so.6(GLIBC_2.1) -
libstdc++.so.6 -
libstdc++.so.6(CXXABI_1.3) -
libstdc++.so.6(GLIBCXX_3.4) -

Provides

Name Value
primer3 == 2.3.6-3:2016.1

Download

Type URL
Mirror mirror.rosalab.ru
Binary Package primer3-2.3.6-3-rosa2016.1.i586.rpm
Source Package primer3-2.3.6-3.src.rpm

Install Howto

  1. Enable ROSA Contrib repository on Install and Remove Software
  2. Update packages list:
    # urpmi.update -a
  3. Install primer3 rpm package:
    # urpmi primer3

Files

Path
/usr/bin/long_seq_tm_test
/usr/bin/ntdpal
/usr/bin/ntthal
/usr/bin/oligotm
/usr/bin/primer3_core
/usr/share/doc/primer3/COPYING.txt
/usr/share/doc/primer3/example
/usr/share/doc/primer3/primer3_manual.htm
/usr/share/doc/primer3/primer3_v1_1_4_default_settings.txt
/usr/share/doc/primer3/primer3web_v0_4_0_default_settings.txt
/usr/share/doc/primer3/primer3web_v3_0_0_default_settings.txt
/usr/share/doc/primer3/primer3web_v4_0_0_default_settings.txt
/usr/share/doc/primer3/release_notes.txt

Changelog

2017-02-17 - Andrey Bondrov <andrey.bondrov@rosalab.ru> 2.3.6-3
- (8c2c717) MassBuild#1257: Increase release tag

See Also

Package Description
prisk-4.0.0-3-rosa2016.1.noarch.rpm Classical 'risk' board game
privoxy-3.0.26-4-rosa2016.1.i586.rpm Privacy enhancing HTTP proxy
processdsn-1.0.0-5-rosa2016.1.i586.rpm Process DSN notifications, record them in a database
proftpd-1.3.5c-2-rosa2016.1.i586.rpm Professional FTP Server
proftpd-devel-1.3.5c-2-rosa2016.1.i586.rpm Development files for ProFTPD
proftpd-mod_autohost-1.3.5c-2-rosa2016.1.i586.rpm An autohost module for ProFTPD
proftpd-mod_ban-1.3.5c-2-rosa2016.1.i586.rpm Adds dynamic "ban" lists to ProFTPD
proftpd-mod_case-1.3.5c-2-rosa2016.1.i586.rpm Makes ProFTPD case insensitive
proftpd-mod_ctrls_admin-1.3.5c-2-rosa2016.1.i586.rpm Module implementing admin control handlers
proftpd-mod_gss-1.3.5c-2-rosa2016.1.i586.rpm A Kerberos 5 GSS module for ProFTPD
proftpd-mod_ifsession-1.3.5c-2-rosa2016.1.i586.rpm Module supporting conditional per-user/group/class configuration contexts
proftpd-mod_ldap-1.3.5c-2-rosa2016.1.i586.rpm LDAP password lookup module for ProFTPD
proftpd-mod_load-1.3.5c-2-rosa2016.1.i586.rpm A module that determines average load for ProFTPD
proftpd-mod_memcache-1.3.5c-2-rosa2016.1.i586.rpm A module for managing memcache data
proftpd-mod_quotatab-1.3.5c-2-rosa2016.1.i586.rpm Module for managing FTP byte/file quotas via centralized tables
Advertisement
Advertisement