R-chipseq-1.18.0-3-rosa2016.1.x86_64.rpm


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Description

R-chipseq - chipseq: A package for analyzing chipseq data

Distribution: ROSA 2016.1
Repository: ROSA Contrib x86_64
Package name: R-chipseq
Package version: 1.18.0
Package release: 3-rosa2016.1
Package architecture: x86_64
Package type: rpm
Installed size: 2.48 MB
Download size: 2.16 MB
Official Mirror: mirror.rosalab.ru
Tools for helping process short read data for chipseq experiments

Alternatives

Provides

  • R-chipseq == 1.18.0-3:2016.1
  • chipseq.so()(64bit)

    Download

    Install Howto

    1. Enable ROSA Contrib repository on Install and Remove Software"
    2. Update packages list:
      # urpmi.update -a
    3. Install R-chipseq rpm package:
      # urpmi R-chipseq

    Files

    • /usr/lib64/R/library/chipseq/DESCRIPTION
    • /usr/lib64/R/library/chipseq/INDEX
    • /usr/lib64/R/library/chipseq/NAMESPACE
    • /usr/lib64/R/library/chipseq/Meta/Rd.rds
    • /usr/lib64/R/library/chipseq/Meta/data.rds
    • /usr/lib64/R/library/chipseq/Meta/hsearch.rds
    • /usr/lib64/R/library/chipseq/Meta/links.rds
    • /usr/lib64/R/library/chipseq/Meta/nsInfo.rds
    • /usr/lib64/R/library/chipseq/Meta/package.rds
    • /usr/lib64/R/library/chipseq/Meta/vignette.rds
    • /usr/lib64/R/library/chipseq/R/chipseq
    • /usr/lib64/R/library/chipseq/R/chipseq.rdb
    • /usr/lib64/R/library/chipseq/R/chipseq.rdx
    • /usr/lib64/R/library/chipseq/Scripts/AntibodyComparison.Rnw
    • /usr/lib64/R/library/chipseq/Scripts/CTCFBindingSites.R
    • /usr/lib64/R/library/chipseq/Scripts/CTCF_ERV.R
    • /usr/lib64/R/library/chipseq/Scripts/CopyNumber.Rnw
    • /usr/lib64/R/library/chipseq/Scripts/Islands.Rnw
    • /usr/lib64/R/library/chipseq/Scripts/MyoD.R
    • /usr/lib64/R/library/chipseq/Scripts/PairedEndComparison.Rnw
    • /usr/lib64/R/library/chipseq/Scripts/PeakContextHuman.Rnw
    • /usr/lib64/R/library/chipseq/Scripts/PeakContextMouse.Rnw
    • /usr/lib64/R/library/chipseq/Scripts/PeakCutoff.Rnw
    • /usr/lib64/R/library/chipseq/Scripts/PeakModel.Rnw
    • /usr/lib64/R/library/chipseq/Scripts/PeakReproducibility.Rnw
    • /usr/lib64/R/library/chipseq/Scripts/PeaksByCopyNumber.Rnw
    • /usr/lib64/R/library/chipseq/Scripts/RateComparison.Rnw
    • /usr/lib64/R/library/chipseq/Scripts/ReadAndSave54.R
    • /usr/lib64/R/library/chipseq/Scripts/ReadAndSaveCTCF.R
    • /usr/lib64/R/library/chipseq/Scripts/ReadAndSaveData.R
    • /usr/lib64/R/library/chipseq/Scripts/ReadAndSaveSimulation.R
    • /usr/lib64/R/library/chipseq/Scripts/SolexaSim.R
    • /usr/lib64/R/library/chipseq/Scripts/abc.rda
    • /usr/lib64/R/library/chipseq/Scripts/antibody_comparison.R
    • /usr/lib64/R/library/chipseq/Scripts/dePeaks.R
    • /usr/lib64/R/library/chipseq/Scripts/diffpeak.R
    • /usr/lib64/R/library/chipseq/Scripts/diffpeaks.R
    • /usr/lib64/R/library/chipseq/Scripts/estimate_fragment_size.R
    • /usr/lib64/R/library/chipseq/Scripts/fibroblasts.R
    • /usr/lib64/R/library/chipseq/Scripts/figs
    • /usr/lib64/R/library/chipseq/Scripts/getIsochores.R
    • /usr/lib64/R/library/chipseq/Scripts/hmm.R
    • /usr/lib64/R/library/chipseq/Scripts/human-islands.R
    • /usr/lib64/R/library/chipseq/Scripts/isochore_comparison.R
    • /usr/lib64/R/library/chipseq/Scripts/isochores.mm9.rda
    • /usr/lib64/R/library/chipseq/Scripts/negbinomial.R
    • /usr/lib64/R/library/chipseq/Scripts/peakContext.R
    • /usr/lib64/R/library/chipseq/Scripts/peak_mle.R
    • /usr/lib64/R/library/chipseq/Scripts/poisson.R
    • /usr/lib64/R/library/chipseq/Scripts/simulate.R
    • /usr/lib64/R/library/chipseq/Scripts/singletons.Rnw
    • /usr/lib64/R/library/chipseq/Scripts/solexa54.R
    • /usr/lib64/R/library/chipseq/data/cstest.rda
    • /usr/lib64/R/library/chipseq/data/datalist
    • /usr/lib64/R/library/chipseq/doc/Workflow.R
    • /usr/lib64/R/library/chipseq/doc/Workflow.Rnw
    • /usr/lib64/R/library/chipseq/doc/Workflow.pdf
    • /usr/lib64/R/library/chipseq/doc/index.html
    • /usr/lib64/R/library/chipseq/help/AnIndex
    • /usr/lib64/R/library/chipseq/help/aliases.rds
    • /usr/lib64/R/library/chipseq/help/chipseq.rdb
    • /usr/lib64/R/library/chipseq/help/chipseq.rdx
    • /usr/lib64/R/library/chipseq/help/paths.rds
    • /usr/lib64/R/library/chipseq/html/00Index.html
    • /usr/lib64/R/library/chipseq/html/R.css
    • /usr/lib64/R/library/chipseq/html/chipseqFilter.html
    • /usr/lib64/R/library/chipseq/html/coverageplot.html
    • /usr/lib64/R/library/chipseq/html/cstest.html
    • /usr/lib64/R/library/chipseq/html/diffPeakSummary.html
    • /usr/lib64/R/library/chipseq/html/estimate.mean.fraglen.html
    • /usr/lib64/R/library/chipseq/html/islandDepthPlot.html
    • /usr/lib64/R/library/chipseq/html/laneSubsample.html
    • /usr/lib64/R/library/chipseq/html/peakCutoff.html
    • /usr/lib64/R/library/chipseq/html/peakSummary-methods.html
    • /usr/lib64/R/library/chipseq/html/subsetSummary.html
    • /usr/lib64/R/library/chipseq/libs/chipseq.so

    Changelog

    2017-03-02 - Andrey Bondrov <andrey.bondrov@rosalab.ru> 1.18.0-3 - (dddd1ca) MassBuild#1273: Increase release tag

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