R-IRanges-2.10.2-1-rosa2016.1.i586.rpm


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Description

R-IRanges - Infrastructure for manipulating intervals on sequences

Property Value
Distribution ROSA 2016.1
Repository ROSA Contrib Updates i586
Package name R-IRanges
Package version 2.10.2
Package release 1-rosa2016.1
Package architecture i586
Package type rpm
Installed size 2.36 MB
Download size 1.38 MB
Official Mirror mirror.rosalab.ru
The package provides efficient low-level and highly reusable S4 classes
for storing ranges of integers, RLE vectors (Run-Length Encoding), and,
more generally, data that can be organized sequentially (formally defined
as Vector objects), as well as views on these Vector objects. Efficient
list-like classes are also provided for storing big collections of
instances of the basic classes. All classes in the package use consistent
naming and share the same rich and consistent "Vector API" as much as

Alternatives

Package Version Architecture Repository
R-IRanges-2.10.2-1-rosa2016.1.x86_64.rpm 2.10.2 x86_64 ROSA Contrib Updates
R-IRanges-2.2.5-5-rosa2016.1.i586.rpm 2.2.5 i586 ROSA Contrib
R-IRanges-2.2.5-5-rosa2016.1.x86_64.rpm 2.2.5 x86_64 ROSA Contrib
R-IRanges - - -

Requires

Name Value
R-BiocGenerics -
R-S4Vectors -
R-methods -
R-stats -
R-utils -
libR.so -
libc.so.6 -
libc.so.6(GLIBC_2.0) -
libc.so.6(GLIBC_2.1.3) -
libc.so.6(GLIBC_2.3.4) -
libc.so.6(GLIBC_2.4) -

Provides

Name Value
IRanges.so -
R-IRanges == 2.10.2-1:2016.1

Download

Type URL
Binary Package R-IRanges-2.10.2-1-rosa2016.1.i586.rpm
Source Package R-IRanges-2.10.2-1.src.rpm

Install Howto

  1. Enable ROSA Contrib Updates repository on Install and Remove Software
  2. Update packages list:
    # urpmi.update -a
  3. Install R-IRanges rpm package:
    # urpmi R-IRanges

Files

Path
/usr/lib/R/library/IRanges/CITATION
/usr/lib/R/library/IRanges/DESCRIPTION
/usr/lib/R/library/IRanges/INDEX
/usr/lib/R/library/IRanges/NAMESPACE
/usr/lib/R/library/IRanges/NEWS
/usr/lib/R/library/IRanges/Meta/Rd.rds
/usr/lib/R/library/IRanges/Meta/hsearch.rds
/usr/lib/R/library/IRanges/Meta/links.rds
/usr/lib/R/library/IRanges/Meta/nsInfo.rds
/usr/lib/R/library/IRanges/Meta/package.rds
/usr/lib/R/library/IRanges/Meta/vignette.rds
/usr/lib/R/library/IRanges/R/IRanges
/usr/lib/R/library/IRanges/R/IRanges.rdb
/usr/lib/R/library/IRanges/R/IRanges.rdx
/usr/lib/R/library/IRanges/doc/IRangesOverview.R
/usr/lib/R/library/IRanges/doc/IRangesOverview.Rnw
/usr/lib/R/library/IRanges/doc/IRangesOverview.pdf
/usr/lib/R/library/IRanges/doc/index.html
/usr/lib/R/library/IRanges/extdata/ce2chrM.bed
/usr/lib/R/library/IRanges/extdata/ce2chrM.fa.out
/usr/lib/R/library/IRanges/extdata/hg18liftAll.lft
/usr/lib/R/library/IRanges/extdata/hs_b36v3_chrY.agp
/usr/lib/R/library/IRanges/help/AnIndex
/usr/lib/R/library/IRanges/help/IRanges.rdb
/usr/lib/R/library/IRanges/help/IRanges.rdx
/usr/lib/R/library/IRanges/help/aliases.rds
/usr/lib/R/library/IRanges/help/paths.rds
/usr/lib/R/library/IRanges/html/00Index.html
/usr/lib/R/library/IRanges/html/AtomicList-class.html
/usr/lib/R/library/IRanges/html/AtomicList-utils.html
/usr/lib/R/library/IRanges/html/CompressedHitsList-class.html
/usr/lib/R/library/IRanges/html/CompressedList-class.html
/usr/lib/R/library/IRanges/html/DataFrame-utils.html
/usr/lib/R/library/IRanges/html/DataFrameList-class.html
/usr/lib/R/library/IRanges/html/Grouping-class.html
/usr/lib/R/library/IRanges/html/Hits-class-leftovers.html
/usr/lib/R/library/IRanges/html/IRanges-class.html
/usr/lib/R/library/IRanges/html/IRanges-constructor.html
/usr/lib/R/library/IRanges/html/IRanges-internals.html
/usr/lib/R/library/IRanges/html/IRanges-utils.html
/usr/lib/R/library/IRanges/html/IRangesList-class.html
/usr/lib/R/library/IRanges/html/List-class-leftovers.html
/usr/lib/R/library/IRanges/html/MaskCollection-class.html
/usr/lib/R/library/IRanges/html/NCList-class.html
/usr/lib/R/library/IRanges/html/R.css
/usr/lib/R/library/IRanges/html/RangedData-class.html
/usr/lib/R/library/IRanges/html/RangedSelection-class.html
/usr/lib/R/library/IRanges/html/Ranges-class.html
/usr/lib/R/library/IRanges/html/Ranges-comparison.html
/usr/lib/R/library/IRanges/html/RangesList-class.html
/usr/lib/R/library/IRanges/html/Rle-class-leftovers.html
/usr/lib/R/library/IRanges/html/RleViews-class.html
/usr/lib/R/library/IRanges/html/RleViewsList-class.html
/usr/lib/R/library/IRanges/html/Vector-class-leftovers.html
/usr/lib/R/library/IRanges/html/Views-class.html
/usr/lib/R/library/IRanges/html/ViewsList-class.html
/usr/lib/R/library/IRanges/html/bind-arrays.html
/usr/lib/R/library/IRanges/html/coverage-methods.html
/usr/lib/R/library/IRanges/html/extractList.html
/usr/lib/R/library/IRanges/html/findOverlaps-methods.html
/usr/lib/R/library/IRanges/html/inter-range-methods.html
/usr/lib/R/library/IRanges/html/intra-range-methods.html
/usr/lib/R/library/IRanges/html/multisplit.html
/usr/lib/R/library/IRanges/html/nearest-methods.html
/usr/lib/R/library/IRanges/html/read.Mask.html
/usr/lib/R/library/IRanges/html/reverse-methods.html
/usr/lib/R/library/IRanges/html/seqapply.html
/usr/lib/R/library/IRanges/html/setops-methods.html
/usr/lib/R/library/IRanges/html/slice-methods.html
/usr/lib/R/library/IRanges/html/view-summarization-methods.html
/usr/lib/R/library/IRanges/include/IRanges_defines.h
/usr/lib/R/library/IRanges/include/IRanges_interface.h
/usr/lib/R/library/IRanges/include/_IRanges_stubs.c
/usr/lib/R/library/IRanges/libs/IRanges.so
/usr/lib/R/library/IRanges/unitTests/test_AtomicList-class.R
/usr/lib/R/library/IRanges/unitTests/test_AtomicList-utils.R
/usr/lib/R/library/IRanges/unitTests/test_DataFrame-utils.R
/usr/lib/R/library/IRanges/unitTests/test_DataFrameList.R
/usr/lib/R/library/IRanges/unitTests/test_Grouping-class.R
/usr/lib/R/library/IRanges/unitTests/test_HitsList.R
/usr/lib/R/library/IRanges/unitTests/test_IRanges-class.R
/usr/lib/R/library/IRanges/unitTests/test_NCList-class.R
/usr/lib/R/library/IRanges/unitTests/test_Ranges-comparison.R
/usr/lib/R/library/IRanges/unitTests/test_RangesList-class.R
/usr/lib/R/library/IRanges/unitTests/test_RleViews.R
/usr/lib/R/library/IRanges/unitTests/test_RleViewsList.R
/usr/lib/R/library/IRanges/unitTests/test_bind-arrays.R
/usr/lib/R/library/IRanges/unitTests/test_coverage-methods.R
/usr/lib/R/library/IRanges/unitTests/test_extractList.R
/usr/lib/R/library/IRanges/unitTests/test_findOverlaps-methods.R
/usr/lib/R/library/IRanges/unitTests/test_inter-range-methods.R
/usr/lib/R/library/IRanges/unitTests/test_intra-range-methods.R
/usr/lib/R/library/IRanges/unitTests/test_nearest-methods.R
/usr/lib/R/library/IRanges/unitTests/test_seqapply.R
/usr/lib/R/library/IRanges/unitTests/test_setops-methods.R
/usr/lib/R/library/IRanges/unitTests/test_split.R
/usr/lib/R/library/IRanges/unitTests/test_tile-methods.R

Changelog

2017-05-30 - Denis Silakov <dsilakov@virtuozzo.com> 2.10.2-1
- (bc0cefc) Disable check

See Also

Package Description
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R-RSQLite-1.0.0-7-rosa2016.1.i586.rpm SQLite interface for R
R-Rcpp-0.12.17-1-rosa2016.1.i586.rpm Seamless R and C++ Integration
R-S4Vectors-0.14.2-1-rosa2016.1.i586.rpm S4 implementation of vectors and lists
R-SummarizedExperiment-1.4.0-1-rosa2016.1.noarch.rpm SummarizedExperiment container
R-airway-0.110.0-1-rosa2016.1.i586.rpm RangedSummarizedExperiment for RNA-Seq in airway smooth muscle cells
R-bibtex-0.4.2-2-rosa2016.1.i586.rpm Bibtex Parser
R-bigmemory-4.5.33-1-rosa2016.1.i586.rpm Manage Massive Matrices with Shared Memory and Memory-Mapped Files
R-bigmemory.sri-0.1.3-1-rosa2016.1.noarch.rpm A shared resource interface for Bigmemory Project packages
R-covr-2.2.2-1-rosa2016.1.i586.rpm Test Coverage for Packages
R-devtools-1.13.6-1-rosa2016.1.i586.rpm Tools to Make Developing R Packages Easier
R-digest-0.6.15-1-rosa2016.1.i586.rpm Create Compact Hash Digests of R Objects
R-git2r-0.21.0-1-rosa2016.1.i586.rpm Provides Access to Git Repositories
R-htmltools-0.3.5-4-rosa2016.1.i586.rpm Tools for HTML
R-httr-1.3.1-1-rosa2016.1.noarch.rpm Tools for Working with URLs and HTTP
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